Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926476.1_cds_XP_016474481.1_66502
CDS Infomation

[gene=LOC107796243] [db_xref=GeneID:107796243] [protein=hydroxymethylglutaryl-CoA lyase, mitochondrial-like] [protein_id=XP_016474481.1] [location=join(31952..32118,32833..33031,33258..33437,33610..33690,33781..33944,34525..34661,35078..35193,35363..35611)] [gbkey=CDS]
Sequence

ATGTCAAGCTTGGAAGAGCCTCTTAACCTGGACAGGTTGCCAAGTTTGAGCAACATTGAT
TGGCTAGAGAGATTCTCATCTGGTGGCTGCAGGCCTATAGGAGAAGATATGGCGATGGGG
GACTCCTGGACTGATGGGAGAAGTTGCAGCTCATCCAACAGCTGTGTTGAAGATGATGAC
GAATATGGGAGAGAGAATTTCAAATGGAGAAGACATGGATCGCGTAACGGCATCTCAAGT
CGAAGGTCCAAGAGTTTTAGCACTAATTATAGAGTATGTGGAACTGTGTCTCATTCACAG
TACTTGACAGATCATCAATATAAATCTTACAGCAACCATAGAAGTACAGTGAGTAAAACG
TTCAAGTTGTTTGATGGCATGCCAAAGTATGTGAAGATAGTGGAAGTTGGTCCAAGGGAT
GGGTTACAAAATGAAAAGAATATTGTTCCTACATCAGTGAAGGTTGAATTAGTTCAAAAA
CTTGTCTCTTGCGGGCTACCTGTTGTTGAAGTGACGGGGTTTGTTTCTCCAAAATGGGTA
CCTCAGCTGTCGGATGCCAAGGATGTAATGGAGGCAGTGAAGGATCTGGAAAGTGCCAGA
TTGCCTGTATTGACACCTAATATGAAAGGCTTTGAAGCAGCTGTTGCAGCTGGGGCGAAA
GAAGTAGCTGTCTTTGCATCAGCTTCGGAGTCTTTTTCAAAGTCAAACATTAATTGCAGT
ATTGAGGAAAGCCTTGTCCGATATCGAGCTGTTACTTCTGCTGCCAAAAAGCTGTCAATA
CCCGTGCGCGGATATGTATCATGTGCTATTGGTTGCCCAGTCGAAGGAGAAATTTCACCT
TCGAAAGTGGCATATGTAGCAAAGGAACTTCATGACATGGGATGCTTTGAAATCTCCCTT
GGAGACACAATAGGAGTCGCTACTCCAGGAAGTGTTGTTCCTATGCTTGAAGCTGTGATG
GCTGTGGTTCCTGTTGAAAAGCTTGCTGTGCATTTCCACGATACCTATGGACAGTCTCTT
TCTAATATTTTAGTTTCCCTCCAAATGGGTATTAGCACAATAGACTCGTCGGTTGCTGGA
CTCGGAGGCTGTCCATATGCCAAAGGAGCAACTGGCAATGTTTCAACTGAAGATGTTGTT
TATATGCTTAACGGTCTAGGGATAAAAACCAACGTCGATATACAGAAACTCTTGCTAGCC
GGAGAGTTCATCAGCAAGTATTTGGACCGGCCATCCGGATCTAAAGCAGCCATTGCTTTG
AGCAGAGTCACAGCAGATGCATCCAAGATATAG

Peptide Sequence

PEP ID

XP_016474481.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Nicotiana tabacum]
Sequence

MSSLEEPLNLDRLPSLSNIDWLERFSSGGCRPIGEDMAMGDSWTDGRSCSSSNSCVEDDD
EYGRENFKWRRHGSRNGISSRRSKSFSTNYRVCGTVSHSQYLTDHQYKSYSNHRSTVSKT
FKLFDGMPKYVKIVEVGPRDGLQNEKNIVPTSVKVELVQKLVSCGLPVVEVTGFVSPKWV
PQLSDAKDVMEAVKDLESARLPVLTPNMKGFEAAVAAGAKEVAVFASASESFSKSNINCS
IEESLVRYRAVTSAAKKLSIPVRGYVSCAIGCPVEGEISPSKVAYVAKELHDMGCFEISL
GDTIGVATPGSVVPMLEAVMAVVPVEKLAVHFHDTYGQSLSNILVSLQMGISTIDSSVAG
LGGCPYAKGATGNVSTEDVVYMLNGLGIKTNVDIQKLLLAGEFISKYLDRPSGSKAAIAL
SRVTADASKI

Transcript Sequence

Gene sequence data has not been registered.